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Cluster: CGMR095874_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_7107 k141_7107_7 5528 6406 + 3.A.1.4.10
TC k141_7107 k141_7107_8 6421 7569 + 3.A.1.4.8
TC k141_7107 k141_7107_9 7573 8412 + 3.A.1.4.10
TC k141_7107 k141_7107_10 8405 9118 + 3.A.1.4.10
pfam k141_7107 k141_7107_11 9498 10280 - Lipase_GDSL | Lipase_GDSL_2
CAZyme k141_7107 k141_7107_12 10374 11681 - GH109
TF k141_7107 k141_7107_13 11835 12698 + HTH_AraC | HTH_AraC
TF k141_7107 k141_7107_14 12779 13594 - HTH_AraC
CAZyme k141_7107 k141_7107_15 13587 15995 - GH78
NULL(UNKNOWN) k141_7107 k141_7107_16 16445 17839 + NULL(UNKNOWN)
[View Structural Homologs]
STP k141_7107 k141_7107_17 17871 20702 + SBP_bac_1
TC k141_7107 k141_7107_18 20714 21649 + 3.A.1.1.25
TC k141_7107 k141_7107_19 21651 22514 + 3.A.1.1.6
Gene ID: k141_7107_7
Type: TC
Location: 5528 - 6406 (+)
Gene ID: k141_7107_8
Type: TC
Location: 6421 - 7569 (+)
Gene ID: k141_7107_9
Type: TC
Location: 7573 - 8412 (+)
Gene ID: k141_7107_10
Type: TC
Location: 8405 - 9118 (+)
Gene ID: k141_7107_11
Type: pfam
Location: 9498 - 10280 (-)
Gene ID: k141_7107_12
Type: CAZyme
Location: 10374 - 11681 (-)
Gene ID: k141_7107_13
Type: TF
Location: 11835 - 12698 (+)
Gene ID: k141_7107_14
Type: TF
Location: 12779 - 13594 (-)
Gene ID: k141_7107_15
Type: CAZyme
Location: 13587 - 15995 (-)
Gene ID: k141_7107_16
Type:
Location: 16445 - 17839 (+)
Gene ID: k141_7107_17
Type: STP
Location: 17871 - 20702 (+)
Gene ID: k141_7107_18
Type: TC
Location: 20714 - 21649 (+)
Gene ID: k141_7107_19
Type: TC
Location: 21651 - 22514 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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