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Cluster: CGMR095874_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_109373 k141_109373_41 43554 44498 + 3.A.1.1.4
TC k141_109373 k141_109373_42 44512 45396 + 3.A.1.1.39
pfam k141_109373 k141_109373_43 45404 47536 + Yip1
pfam k141_109373 k141_109373_44 47551 49854 + DUF5696
TC k141_109373 k141_109373_45 49851 50753 + 3.A.1.1.11
TC k141_109373 k141_109373_46 50766 51740 + 3.A.1.1.11
STP k141_109373 k141_109373_47 51872 53359 + SBP_bac_1
TF k141_109373 k141_109373_48 53564 54994 + HTH_AraC | HTH_AraC
TC k141_109373 k141_109373_49 54991 56757 + 9.B.33.1.1
NULL(UNKNOWN) k141_109373 k141_109373_50 56754 58205 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_109373 k141_109373_51 58387 60900 + Cadherin_4 | Cadherin_4 | Cadherin_4 | Cadherin_5 | Cadherin_5 | Cadherin_5 | Big_9 | Big_9 | Big_9
CAZyme k141_109373 k141_109373_52 61290 63629 + GH65
Gene ID: k141_109373_41
Type: TC
Location: 43554 - 44498 (+)
Gene ID: k141_109373_42
Type: TC
Location: 44512 - 45396 (+)
Gene ID: k141_109373_43
Type: pfam
Location: 45404 - 47536 (+)
Gene ID: k141_109373_44
Type: pfam
Location: 47551 - 49854 (+)
Gene ID: k141_109373_45
Type: TC
Location: 49851 - 50753 (+)
Gene ID: k141_109373_46
Type: TC
Location: 50766 - 51740 (+)
Gene ID: k141_109373_47
Type: STP
Location: 51872 - 53359 (+)
Gene ID: k141_109373_48
Type: TF
Location: 53564 - 54994 (+)
Gene ID: k141_109373_49
Type: TC
Location: 54991 - 56757 (+)
Gene ID: k141_109373_50
Type:
Location: 56754 - 58205 (+)
Gene ID: k141_109373_51
Type: pfam
Location: 58387 - 60900 (+)
Gene ID: k141_109373_52
Type: CAZyme
Location: 61290 - 63629 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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