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Cluster: CGMR095572_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_41443 k141_41443_6 5084 6535 - GH43_35
NULL(UNKNOWN) k141_41443 k141_41443_7 6565 6984 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_41443 k141_41443_8 6997 10026 - GH3
CAZyme k141_41443 k141_41443_9 10197 12614 - GH2
pfam k141_41443 k141_41443_10 12841 14175 - MatE | MatE | MurJ
pfam k141_41443 k141_41443_11 14200 14937 - PseudoU_synth_1 | PseudoU_synth_1
TC k141_41443 k141_41443_12 15028 15831 - 3.A.1.25.4
TC k141_41443 k141_41443_13 15828 16715 - 3.A.1.26.7
TC k141_41443 k141_41443_14 16700 17551 - 3.A.1.26.7
Gene ID: k141_41443_6
Type: CAZyme
Location: 5084 - 6535 (-)
Gene ID: k141_41443_7
Type:
Location: 6565 - 6984 (-)
Gene ID: k141_41443_8
Type: CAZyme
Location: 6997 - 10026 (-)
Gene ID: k141_41443_9
Type: CAZyme
Location: 10197 - 12614 (-)
Gene ID: k141_41443_10
Type: pfam
Location: 12841 - 14175 (-)
Gene ID: k141_41443_11
Type: pfam
Location: 14200 - 14937 (-)
Gene ID: k141_41443_12
Type: TC
Location: 15028 - 15831 (-)
Gene ID: k141_41443_13
Type: TC
Location: 15828 - 16715 (-)
Gene ID: k141_41443_14
Type: TC
Location: 16700 - 17551 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_41443_7 vegan > omnivore 1.25359 0.00328
k141_41443_10 vegan > omnivore 1.63611 0.00328
k141_41443_10 vegetarian > omnivore 1.84952 0.00565

🧭 Explore Read Mapping of CGC

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