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Cluster: CGMR095572_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_172296 k141_172296_20 24271 25083 + 3.A.1.104.1
TC k141_172296 k141_172296_21 25107 26372 + 3.A.1.103.6
pfam k141_172296 k141_172296_22 26375 28567 + Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme k141_172296 k141_172296_23 28601 31114 + GT2 | GT2
CAZyme k141_172296 k141_172296_24 31107 33551 + GT2 | GT2
pfam k141_172296 k141_172296_25 33565 36045 + YfhO | YfhO
peptidase k141_172296 k141_172296_26 36157 37410 - S11.UNW
CAZyme k141_172296 k141_172296_27 37571 39430 + GT2 | GT2
CAZyme k141_172296 k141_172296_28 39435 40391 + GT2
TC k141_172296 k141_172296_29 40500 41903 + 9.B.18.1.1
pfam k141_172296 k141_172296_30 41922 43277 + LytR_cpsA_psr
CAZyme k141_172296 k141_172296_31 43349 44278 + GT2
Gene ID: k141_172296_20
Type: TC
Location: 24271 - 25083 (+)
Gene ID: k141_172296_21
Type: TC
Location: 25107 - 26372 (+)
Gene ID: k141_172296_22
Type: pfam
Location: 26375 - 28567 (+)
Gene ID: k141_172296_23
Type: CAZyme
Location: 28601 - 31114 (+)
Gene ID: k141_172296_24
Type: CAZyme
Location: 31107 - 33551 (+)
Gene ID: k141_172296_25
Type: pfam
Location: 33565 - 36045 (+)
Gene ID: k141_172296_26
Type: peptidase
Location: 36157 - 37410 (-)
Gene ID: k141_172296_27
Type: CAZyme
Location: 37571 - 39430 (+)
Gene ID: k141_172296_28
Type: CAZyme
Location: 39435 - 40391 (+)
Gene ID: k141_172296_29
Type: TC
Location: 40500 - 41903 (+)
Gene ID: k141_172296_30
Type: pfam
Location: 41922 - 43277 (+)
Gene ID: k141_172296_31
Type: CAZyme
Location: 43349 - 44278 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_172296_20 vegan > omnivore 1.26375 0.00328
k141_172296_24 vegan > omnivore 1.04054 0.00328

🧭 Explore Read Mapping of CGC

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