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Cluster: CGMR095572_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_69665 k141_69665_45 50242 51504 + 2.A.1.11.1
pfam k141_69665 k141_69665_46 51667 52863 + PucR | HTH_30 | GGDEF_2
TC k141_69665 k141_69665_47 53105 53977 + 3.A.1.3.20
TC k141_69665 k141_69665_48 53996 54760 + 3.A.1.3.20
TC k141_69665 k141_69665_49 54774 55514 + 3.A.1.3.20
TC k141_69665 k141_69665_50 55528 56208 + 2.A.115.2.14
pfam k141_69665 k141_69665_51 56205 57422 + Aminotran_3 | Beta_elim_lyase
pfam k141_69665 k141_69665_52 57441 58589 + Fe-ADH | Fe-ADH_2 | ADH_Fe_C
CAZyme k141_69665 k141_69665_53 58796 61171 + GH78
TC k141_69665 k141_69665_54 61202 62923 + 8.A.59.2.1
TF k141_69665 k141_69665_55 62898 64439 + HTH_AraC | HTH_AraC
TC k141_69665 k141_69665_56 64563 65864 + 3.A.1.1.28
TC k141_69665 k141_69665_57 65943 66830 + 3.A.1.1.32
TC k141_69665 k141_69665_58 66842 67681 + 3.A.1.1.33
Gene ID: k141_69665_45
Type: TC
Location: 50242 - 51504 (+)
Gene ID: k141_69665_46
Type: pfam
Location: 51667 - 52863 (+)
Gene ID: k141_69665_47
Type: TC
Location: 53105 - 53977 (+)
Gene ID: k141_69665_48
Type: TC
Location: 53996 - 54760 (+)
Gene ID: k141_69665_49
Type: TC
Location: 54774 - 55514 (+)
Gene ID: k141_69665_50
Type: TC
Location: 55528 - 56208 (+)
Gene ID: k141_69665_51
Type: pfam
Location: 56205 - 57422 (+)
Gene ID: k141_69665_52
Type: pfam
Location: 57441 - 58589 (+)
Gene ID: k141_69665_53
Type: CAZyme
Location: 58796 - 61171 (+)
Gene ID: k141_69665_54
Type: TC
Location: 61202 - 62923 (+)
Gene ID: k141_69665_55
Type: TF
Location: 62898 - 64439 (+)
Gene ID: k141_69665_56
Type: TC
Location: 64563 - 65864 (+)
Gene ID: k141_69665_57
Type: TC
Location: 65943 - 66830 (+)
Gene ID: k141_69665_58
Type: TC
Location: 66842 - 67681 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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