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Cluster: CGMR095572_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_65456 k141_65456_4 1235 1660 - 2.A.5.5.2
NULL(UNKNOWN) k141_65456 k141_65456_5 1670 1852 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase k141_65456 k141_65456_6 2030 3223 - S12.950
CAZyme k141_65456 k141_65456_7 3230 5584 - GH3
TC k141_65456 k141_65456_8 5587 6963 - 2.A.2.3.3
TF k141_65456 k141_65456_9 7169 8278 + HTH_AraC
CAZyme k141_65456 k141_65456_10 8311 9369 - GH43_24
TC k141_65456 k141_65456_11 9895 10479 - 3.A.1.25.5
Gene ID: k141_65456_4
Type: TC
Location: 1235 - 1660 (-)
Gene ID: k141_65456_5
Type:
Location: 1670 - 1852 (-)
Gene ID: k141_65456_6
Type: peptidase
Location: 2030 - 3223 (-)
Gene ID: k141_65456_7
Type: CAZyme
Location: 3230 - 5584 (-)
Gene ID: k141_65456_8
Type: TC
Location: 5587 - 6963 (-)
Gene ID: k141_65456_9
Type: TF
Location: 7169 - 8278 (+)
Gene ID: k141_65456_10
Type: CAZyme
Location: 8311 - 9369 (-)
Gene ID: k141_65456_11
Type: TC
Location: 9895 - 10479 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_65456_11 vegan > omnivore 2.15613 0.00328

🧭 Explore Read Mapping of CGC

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