dbCAN Logo

Cluster: CGMR095572_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_46418 k141_46418_50 52906 53139 - 3.D.1.6.4
TC k141_46418 k141_46418_51 53281 54441 - 2.A.103.1.3
CAZyme k141_46418 k141_46418_52 55110 56438 - GH29
TC k141_46418 k141_46418_53 56468 57289 - 3.A.1.1.28
TC k141_46418 k141_46418_54 57291 58160 - 3.A.1.1.7
STP k141_46418 k141_46418_55 58237 59505 - SBP_bac_1
TC k141_46418 k141_46418_56 59713 61551 + 8.A.59.2.1
CAZyme k141_46418 k141_46418_57 61583 63898 - GH95
Gene ID: k141_46418_50
Type: TC
Location: 52906 - 53139 (-)
Gene ID: k141_46418_51
Type: TC
Location: 53281 - 54441 (-)
Gene ID: k141_46418_52
Type: CAZyme
Location: 55110 - 56438 (-)
Gene ID: k141_46418_53
Type: TC
Location: 56468 - 57289 (-)
Gene ID: k141_46418_54
Type: TC
Location: 57291 - 58160 (-)
Gene ID: k141_46418_55
Type: STP
Location: 58237 - 59505 (-)
Gene ID: k141_46418_56
Type: TC
Location: 59713 - 61551 (+)
Gene ID: k141_46418_57
Type: CAZyme
Location: 61583 - 63898 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_46418_52 vegan > omnivore 1.29684 0.00328
k141_46418_53 vegan > omnivore 1.42341 0.00328
k141_46418_54 vegan > omnivore 3.02176 0.00328
k141_46418_55 vegan > omnivore 1.75811 0.00328
k141_46418_56 vegan > omnivore 1.49516 0.00328

🧭 Explore Read Mapping of CGC

← Back to Cluster List