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Cluster: CGMR095572_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_253160 k141_253160_13 13386 14579 + 2.A.1.2.65
CAZyme k141_253160 k141_253160_14 14721 16838 - GH36
TF k141_253160 k141_253160_15 17084 18031 + HTH_AraC
TC k141_253160 k141_253160_16 18169 20244 - 3.A.3.32.3
pfam k141_253160 k141_253160_17 20259 20600 - DUF6110
TF k141_253160 k141_253160_18 20864 21322 - FUR
TC k141_253160 k141_253160_19 21659 22774 + 3.A.1.1.26
TF k141_253160 k141_253160_20 22876 23961 + 0037176
TC k141_253160 k141_253160_21 23972 25021 - 3.A.1.11.2
TC k141_253160 k141_253160_22 25021 25716 - 3.A.1.8.1
Gene ID: k141_253160_13
Type: TC
Location: 13386 - 14579 (+)
Gene ID: k141_253160_14
Type: CAZyme
Location: 14721 - 16838 (-)
Gene ID: k141_253160_15
Type: TF
Location: 17084 - 18031 (+)
Gene ID: k141_253160_16
Type: TC
Location: 18169 - 20244 (-)
Gene ID: k141_253160_17
Type: pfam
Location: 20259 - 20600 (-)
Gene ID: k141_253160_18
Type: TF
Location: 20864 - 21322 (-)
Gene ID: k141_253160_19
Type: TC
Location: 21659 - 22774 (+)
Gene ID: k141_253160_20
Type: TF
Location: 22876 - 23961 (+)
Gene ID: k141_253160_21
Type: TC
Location: 23972 - 25021 (-)
Gene ID: k141_253160_22
Type: TC
Location: 25021 - 25716 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_253160_13 vegetarian > omnivore 1.13536 0.01158
k141_253160_18 vegan > omnivore 1.51727 0.00328
k141_253160_18 vegetarian > omnivore 2.43487 0.00109

🧭 Explore Read Mapping of CGC

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