Cluster: CGMR095143_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR095143
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_5443 | k141_5443_4 | 3728 | 4441 | + | 3.A.1.132.1 |
| CAZyme | k141_5443 | k141_5443_5 | 4438 | 6456 | + | GH13_11 |
| pfam | k141_5443 | k141_5443_6 | 6606 | 8279 | - | tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2 |
| pfam | k141_5443 | k141_5443_7 | 8463 | 8615 | + | FixS |
| TC | k141_5443 | k141_5443_8 | 8616 | 10886 | + | 3.D.4.3.3 |
Gene ID: k141_5443_4
Type: TC
Location: 3728 - 4441 (+)
Type: TC
Location: 3728 - 4441 (+)
Gene ID: k141_5443_5
Type: CAZyme
Location: 4438 - 6456 (+)
Type: CAZyme
Location: 4438 - 6456 (+)
Gene ID: k141_5443_6
Type: pfam
Location: 6606 - 8279 (-)
Type: pfam
Location: 6606 - 8279 (-)
Gene ID: k141_5443_7
Type: pfam
Location: 8463 - 8615 (+)
Type: pfam
Location: 8463 - 8615 (+)
Gene ID: k141_5443_8
Type: TC
Location: 8616 - 10886 (+)
Type: TC
Location: 8616 - 10886 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Profundicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.