Cluster: CGMR095143_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR095143
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_165031 | k141_165031_24 | 22989 | 24218 | + | 9.B.146.1.6 |
| pfam | k141_165031 | k141_165031_25 | 24219 | 25553 | + | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | k141_165031 | k141_165031_26 | 25556 | 26755 | + | 2.A.103.1.3 |
| CAZyme | k141_165031 | k141_165031_27 | 26727 | 27845 | + | GT28 |
| pfam | k141_165031 | k141_165031_28 | 27835 | 29181 | + | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| NULL(UNKNOWN) | k141_165031 | k141_165031_29 | 29178 | 29900 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_165031 | k141_165031_30 | 29887 | 31317 | + | 9.B.157.1.3 |
Gene ID: k141_165031_24
Type: TC
Location: 22989 - 24218 (+)
Type: TC
Location: 22989 - 24218 (+)
Gene ID: k141_165031_25
Type: pfam
Location: 24219 - 25553 (+)
Type: pfam
Location: 24219 - 25553 (+)
Gene ID: k141_165031_26
Type: TC
Location: 25556 - 26755 (+)
Type: TC
Location: 25556 - 26755 (+)
Gene ID: k141_165031_27
Type: CAZyme
Location: 26727 - 27845 (+)
Type: CAZyme
Location: 26727 - 27845 (+)
Gene ID: k141_165031_28
Type: pfam
Location: 27835 - 29181 (+)
Type: pfam
Location: 27835 - 29181 (+)
Gene ID: k141_165031_29
Type:
Location: 29178 - 29900 (+)
Type:
Location: 29178 - 29900 (+)
Gene ID: k141_165031_30
Type: TC
Location: 29887 - 31317 (+)
Type: TC
Location: 29887 - 31317 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Profundicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.