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Cluster: CGMR095089_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_99573 k141_99573_20 19167 20906 - 3.A.1.203.11
TC k141_99573 k141_99573_21 20986 23085 - 1.B.14.7.1
pfam k141_99573 k141_99573_22 23329 23664 - YjdM | Zn_Ribbon_YjdM
TC k141_99573 k141_99573_23 23752 24372 - 1.A.62.2.3
pfam k141_99573 k141_99573_24 24910 27321 + FMN_bind | Fer4_5 | Fer4_5
pfam k141_99573 k141_99573_25 27381 29312 + COX2 | nos_propeller | nos_propeller_2
TC k141_99573 k141_99573_26 29327 30631 + 3.A.1.132.2
TC k141_99573 k141_99573_27 30621 31523 + 3.A.1.132.2
TC k141_99573 k141_99573_28 31520 32350 + 3.A.1.132.2
pfam k141_99573 k141_99573_29 32368 32985 + NosL
pfam k141_99573 k141_99573_30 33007 34014 + ApbE
CAZyme k141_99573 k141_99573_31 34092 34925 - CE1
Gene ID: k141_99573_20
Type: TC
Location: 19167 - 20906 (-)
Gene ID: k141_99573_21
Type: TC
Location: 20986 - 23085 (-)
Gene ID: k141_99573_22
Type: pfam
Location: 23329 - 23664 (-)
Gene ID: k141_99573_23
Type: TC
Location: 23752 - 24372 (-)
Gene ID: k141_99573_24
Type: pfam
Location: 24910 - 27321 (+)
Gene ID: k141_99573_25
Type: pfam
Location: 27381 - 29312 (+)
Gene ID: k141_99573_26
Type: TC
Location: 29327 - 30631 (+)
Gene ID: k141_99573_27
Type: TC
Location: 30621 - 31523 (+)
Gene ID: k141_99573_28
Type: TC
Location: 31520 - 32350 (+)
Gene ID: k141_99573_29
Type: pfam
Location: 32368 - 32985 (+)
Gene ID: k141_99573_30
Type: pfam
Location: 33007 - 34014 (+)
Gene ID: k141_99573_31
Type: CAZyme
Location: 34092 - 34925 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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