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Cluster: CGMR095089_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_83295 k141_83295_18 15965 17617 + 4.C.1.1.6
pfam k141_83295 k141_83295_19 17701 18357 - 5-FTHF_cyc-lig
CAZyme k141_83295 k141_83295_20 18407 20458 + GH23
pfam k141_83295 k141_83295_21 20478 21737 + PolyA_pol | PolyA_pol_RNAbd
TC k141_83295 k141_83295_22 21742 22200 - 2.A.7.21.1
pfam k141_83295 k141_83295_23 22234 23547 - Methyltransf_28
CAZyme k141_83295 k141_83295_24 23537 24424 - CE1
pfam k141_83295 k141_83295_25 24592 25392 - Exo_endo_phos
TC k141_83295 k141_83295_26 25509 28013 - 3.A.1.122.15
TC k141_83295 k141_83295_27 28018 28713 - 3.A.1.122.15
Gene ID: k141_83295_18
Type: TC
Location: 15965 - 17617 (+)
Gene ID: k141_83295_19
Type: pfam
Location: 17701 - 18357 (-)
Gene ID: k141_83295_20
Type: CAZyme
Location: 18407 - 20458 (+)
Gene ID: k141_83295_21
Type: pfam
Location: 20478 - 21737 (+)
Gene ID: k141_83295_22
Type: TC
Location: 21742 - 22200 (-)
Gene ID: k141_83295_23
Type: pfam
Location: 22234 - 23547 (-)
Gene ID: k141_83295_24
Type: CAZyme
Location: 23537 - 24424 (-)
Gene ID: k141_83295_25
Type: pfam
Location: 24592 - 25392 (-)
Gene ID: k141_83295_26
Type: TC
Location: 25509 - 28013 (-)
Gene ID: k141_83295_27
Type: TC
Location: 28018 - 28713 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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