Cluster: CGMR095089_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR095089
- CGC Family ID: CGCFAM_04647
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_29904 | k141_29904_19 | 21061 | 22278 | - | GH103 |
| TC | k141_29904 | k141_29904_20 | 22391 | 24616 | + | 9.B.174.1.2 |
| NULL(UNKNOWN) | k141_29904 | k141_29904_21 | 24674 | 25363 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_29904 | k141_29904_22 | 25824 | 26438 | - | 9.B.186.1.2 |
| pfam | k141_29904 | k141_29904_23 | 26431 | 27114 | - | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| pfam | k141_29904 | k141_29904_24 | 27111 | 27824 | - | Ubie_methyltran | CMAS | MTS | PrmA | Methyltransf_9 | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | k141_29904 | k141_29904_25 | 27972 | 28538 | - | 1.B.6.1.1 |
Gene ID: k141_29904_19
Type: CAZyme
Location: 21061 - 22278 (-)
Type: CAZyme
Location: 21061 - 22278 (-)
Gene ID: k141_29904_20
Type: TC
Location: 22391 - 24616 (+)
Type: TC
Location: 22391 - 24616 (+)
Gene ID: k141_29904_21
Type:
Location: 24674 - 25363 (-)
Type:
Location: 24674 - 25363 (-)
Gene ID: k141_29904_22
Type: TC
Location: 25824 - 26438 (-)
Type: TC
Location: 25824 - 26438 (-)
Gene ID: k141_29904_23
Type: pfam
Location: 26431 - 27114 (-)
Type: pfam
Location: 26431 - 27114 (-)
Gene ID: k141_29904_24
Type: pfam
Location: 27111 - 27824 (-)
Type: pfam
Location: 27111 - 27824 (-)
Gene ID: k141_29904_25
Type: TC
Location: 27972 - 28538 (-)
Type: TC
Location: 27972 - 28538 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oligella
Species
Oligella sp012511555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.