Cluster: CGMR095089_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR095089
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_212986 | k141_212986_1 | 1 | 813 | - | 3.A.1.27.3 |
| TC | k141_212986 | k141_212986_2 | 960 | 2354 | + | 1.I.1.1.3 |
| STP | k141_212986 | k141_212986_3 | 2522 | 3412 | + | Sigma70_r2 | Sigma70_r4 |
| CAZyme | k141_212986 | k141_212986_4 | 3947 | 5047 | + | GT4 |
| CAZyme | k141_212986 | k141_212986_5 | 5040 | 5876 | + | CE4 |
Gene ID: k141_212986_1
Type: TC
Location: 1 - 813 (-)
Type: TC
Location: 1 - 813 (-)
Gene ID: k141_212986_2
Type: TC
Location: 960 - 2354 (+)
Type: TC
Location: 960 - 2354 (+)
Gene ID: k141_212986_3
Type: STP
Location: 2522 - 3412 (+)
Type: STP
Location: 2522 - 3412 (+)
Gene ID: k141_212986_4
Type: CAZyme
Location: 3947 - 5047 (+)
Type: CAZyme
Location: 3947 - 5047 (+)
Gene ID: k141_212986_5
Type: CAZyme
Location: 5040 - 5876 (+)
Type: CAZyme
Location: 5040 - 5876 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oligella
Species
Oligella sp012511555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.