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Cluster: CGMR094714_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_426817 k141_426817_2 443 1828 + 2.A.23.1.1
pfam k141_426817 k141_426817_3 1952 3157 - Arginosuc_synth | Arginosuc_syn_C
TC k141_426817 k141_426817_4 3182 4564 - 2.A.38.1.1
TC k141_426817 k141_426817_5 5151 6182 + 1.A.26.1.2
TC k141_426817 k141_426817_6 6299 7603 + 2.A.1.25.2
pfam k141_426817 k141_426817_7 7688 8374 - FAA_hydrolase
NULL(UNKNOWN) k141_426817 k141_426817_8 8571 9503 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_426817 k141_426817_9 9700 12120 - 1.B.12.8.1
pfam k141_426817 k141_426817_10 12644 13498 - FdhE_central | FdhE_C
TC k141_426817 k141_426817_11 13583 14221 - 5.A.3.2.1
TC k141_426817 k141_426817_12 14225 15163 - 5.A.3.2.1
TC k141_426817 k141_426817_13 15180 18239 - 5.A.3.2.1
pfam k141_426817 k141_426817_14 18504 19262 + DUF34_NIF3
pfam k141_426817 k141_426817_15 19334 22696 + TamB
CAZyme k141_426817 k141_426817_16 22872 24494 + AA3_2
STP k141_426817 k141_426817_17 24654 25301 + Nitroreductase
TC k141_426817 k141_426817_18 25437 25853 - 9.B.102.5.5
TC k141_426817 k141_426817_19 25865 26284 - 9.B.102.5.2
TC k141_426817 k141_426817_20 26640 28274 + 2.A.58.2.2
pfam k141_426817 k141_426817_21 28588 30471 + AAA_15 | AAA_21 | OLD-like_TOPRIM
TC k141_426817 k141_426817_22 30656 32005 + 5.B.1.6.1
pfam k141_426817 k141_426817_23 32148 33152 + ALAD
pfam k141_426817 k141_426817_24 33280 34617 - DAO
TC k141_426817 k141_426817_25 34764 35489 - 2.A.76.1.5
Gene ID: k141_426817_2
Type: TC
Location: 443 - 1828 (+)
Gene ID: k141_426817_3
Type: pfam
Location: 1952 - 3157 (-)
Gene ID: k141_426817_4
Type: TC
Location: 3182 - 4564 (-)
Gene ID: k141_426817_5
Type: TC
Location: 5151 - 6182 (+)
Gene ID: k141_426817_6
Type: TC
Location: 6299 - 7603 (+)
Gene ID: k141_426817_7
Type: pfam
Location: 7688 - 8374 (-)
Gene ID: k141_426817_8
Type:
Location: 8571 - 9503 (-)
Gene ID: k141_426817_9
Type: TC
Location: 9700 - 12120 (-)
Gene ID: k141_426817_10
Type: pfam
Location: 12644 - 13498 (-)
Gene ID: k141_426817_11
Type: TC
Location: 13583 - 14221 (-)
Gene ID: k141_426817_12
Type: TC
Location: 14225 - 15163 (-)
Gene ID: k141_426817_13
Type: TC
Location: 15180 - 18239 (-)
Gene ID: k141_426817_14
Type: pfam
Location: 18504 - 19262 (+)
Gene ID: k141_426817_15
Type: pfam
Location: 19334 - 22696 (+)
Gene ID: k141_426817_16
Type: CAZyme
Location: 22872 - 24494 (+)
Gene ID: k141_426817_17
Type: STP
Location: 24654 - 25301 (+)
Gene ID: k141_426817_18
Type: TC
Location: 25437 - 25853 (-)
Gene ID: k141_426817_19
Type: TC
Location: 25865 - 26284 (-)
Gene ID: k141_426817_20
Type: TC
Location: 26640 - 28274 (+)
Gene ID: k141_426817_21
Type: pfam
Location: 28588 - 30471 (+)
Gene ID: k141_426817_22
Type: TC
Location: 30656 - 32005 (+)
Gene ID: k141_426817_23
Type: pfam
Location: 32148 - 33152 (+)
Gene ID: k141_426817_24
Type: pfam
Location: 33280 - 34617 (-)
Gene ID: k141_426817_25
Type: TC
Location: 34764 - 35489 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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