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Cluster: CGMR094644_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_63449 k141_63449_43 44978 45421 + 4.A.6.1.16
pfam k141_63449 k141_63449_44 45421 45702 + YajC
TC k141_63449 k141_63449_45 45739 46221 + 4.A.6.1.4
TC k141_63449 k141_63449_46 46312 47112 + 4.A.6.1.4
TC k141_63449 k141_63449_47 47102 48184 + 4.A.6.1.4
TF k141_63449 k141_63449_48 48370 49101 + GntR
STP k141_63449 k141_63449_49 49216 50382 + SIS | SIS
CAZyme k141_63449 k141_63449_50 50503 51672 + CE9
Gene ID: k141_63449_43
Type: TC
Location: 44978 - 45421 (+)
Gene ID: k141_63449_44
Type: pfam
Location: 45421 - 45702 (+)
Gene ID: k141_63449_45
Type: TC
Location: 45739 - 46221 (+)
Gene ID: k141_63449_46
Type: TC
Location: 46312 - 47112 (+)
Gene ID: k141_63449_47
Type: TC
Location: 47102 - 48184 (+)
Gene ID: k141_63449_48
Type: TF
Location: 48370 - 49101 (+)
Gene ID: k141_63449_49
Type: STP
Location: 49216 - 50382 (+)
Gene ID: k141_63449_50
Type: CAZyme
Location: 50503 - 51672 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_63449_44 vegan > omnivore 1.03317 0.00863

🧭 Explore Read Mapping of CGC

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