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Cluster: CGMR094644_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_134635 k141_134635_3 1348 2724 - GH13_20
TC k141_134635 k141_134635_4 2878 4074 - 2.A.1.2.18
NULL(UNKNOWN) k141_134635 k141_134635_5 4250 5002 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_134635 k141_134635_6 5168 6541 - GH4
TF k141_134635 k141_134635_7 6717 7469 + HTH_6
TC k141_134635 k141_134635_8 7532 9196 - 4.A.1.1.3
TC k141_134635 k141_134635_9 9511 11871 - 9.A.8.1.6
peptidase k141_134635 k141_134635_10 12344 13243 - S09.UPW
TC k141_134635 k141_134635_11 13486 14049 + 4.A.1.2.6
pfam k141_134635 k141_134635_12 14231 15634 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) k141_134635 k141_134635_13 15893 16678 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_134635 k141_134635_14 16839 17819 + 3.A.1.34.1
TC k141_134635 k141_134635_15 18024 18947 + 3.A.1.34.1
TC k141_134635 k141_134635_16 18940 19734 + 3.A.1.34.1
Gene ID: k141_134635_3
Type: CAZyme
Location: 1348 - 2724 (-)
Gene ID: k141_134635_4
Type: TC
Location: 2878 - 4074 (-)
Gene ID: k141_134635_5
Type:
Location: 4250 - 5002 (-)
Gene ID: k141_134635_6
Type: CAZyme
Location: 5168 - 6541 (-)
Gene ID: k141_134635_7
Type: TF
Location: 6717 - 7469 (+)
Gene ID: k141_134635_8
Type: TC
Location: 7532 - 9196 (-)
Gene ID: k141_134635_9
Type: TC
Location: 9511 - 11871 (-)
Gene ID: k141_134635_10
Type: peptidase
Location: 12344 - 13243 (-)
Gene ID: k141_134635_11
Type: TC
Location: 13486 - 14049 (+)
Gene ID: k141_134635_12
Type: pfam
Location: 14231 - 15634 (+)
Gene ID: k141_134635_13
Type:
Location: 15893 - 16678 (+)
Gene ID: k141_134635_14
Type: TC
Location: 16839 - 17819 (+)
Gene ID: k141_134635_15
Type: TC
Location: 18024 - 18947 (+)
Gene ID: k141_134635_16
Type: TC
Location: 18940 - 19734 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_134635_5 vegan > omnivore 1.48412 0.00863
k141_134635_6 vegan > omnivore 1.18450 0.00863

🧭 Explore Read Mapping of CGC

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