Cluster: CGMR094357_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR094357
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_41398 | k141_41398_2 | 388 | 771 | - | 1.A.22.1.1 |
| TC | k141_41398 | k141_41398_3 | 850 | 2226 | - | 2.A.38.1.1 |
| CAZyme | k141_41398 | k141_41398_4 | 2223 | 3038 | - | GT2 |
Gene ID: k141_41398_2
Type: TC
Location: 388 - 771 (-)
Type: TC
Location: 388 - 771 (-)
Gene ID: k141_41398_3
Type: TC
Location: 850 - 2226 (-)
Type: TC
Location: 850 - 2226 (-)
Gene ID: k141_41398_4
Type: CAZyme
Location: 2223 - 3038 (-)
Type: CAZyme
Location: 2223 - 3038 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_41398_2 | vegan > omnivore | 1.78837 | 0.00918 |
| k141_41398_2 | vegetarian > omnivore | 3.11351 | 0.00397 |
| k141_41398_2 | vegetarian > vegan | 1.32514 | 0.02700 |
| k141_41398_3 | vegetarian > omnivore | 1.31980 | 0.00397 |
| k141_41398_4 | vegan > omnivore | 1.59832 | 0.00918 |
| k141_41398_4 | vegetarian > omnivore | 1.05224 | 0.00397 |