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Cluster: CGMR094357_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_17854 k141_17854_3 2910 3704 - 1.A.16.2.5
NULL(UNKNOWN) k141_17854 k141_17854_4 3925 4515 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_17854 k141_17854_5 5385 5840 + DUF411
CAZyme k141_17854 k141_17854_6 5852 7399 + AA1
pfam k141_17854 k141_17854_7 7493 7960 - SSB
pfam k141_17854 k141_17854_8 8123 10954 + UvrA_DNA-bind | UvrA_inter
TC k141_17854 k141_17854_9 11010 12536 - 2.A.1.3.2
TC k141_17854 k141_17854_10 12545 13714 - 8.A.1.1.1
TC k141_17854 k141_17854_11 14117 16435 + 1.B.40.2.2
Gene ID: k141_17854_3
Type: TC
Location: 2910 - 3704 (-)
Gene ID: k141_17854_4
Type:
Location: 3925 - 4515 (-)
Gene ID: k141_17854_5
Type: pfam
Location: 5385 - 5840 (+)
Gene ID: k141_17854_6
Type: CAZyme
Location: 5852 - 7399 (+)
Gene ID: k141_17854_7
Type: pfam
Location: 7493 - 7960 (-)
Gene ID: k141_17854_8
Type: pfam
Location: 8123 - 10954 (+)
Gene ID: k141_17854_9
Type: TC
Location: 11010 - 12536 (-)
Gene ID: k141_17854_10
Type: TC
Location: 12545 - 13714 (-)
Gene ID: k141_17854_11
Type: TC
Location: 14117 - 16435 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_17854_4 vegetarian > omnivore 2.49943 0.00397
k141_17854_4 vegetarian > vegan 2.20578 0.00548
k141_17854_7 vegan > omnivore 1.45891 0.00918
k141_17854_9 vegan > omnivore 1.18934 0.00918

🧭 Explore Read Mapping of CGC

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