Cluster: CGMR094357_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR094357
- CGC Family ID: CGCFAM_00063
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_12851 | k141_12851_4 | 2318 | 6091 | + | GH77 | GT35 |
| pfam | k141_12851 | k141_12851_5 | 6101 | 6892 | + | Exo_endo_phos |
| TC | k141_12851 | k141_12851_6 | 6903 | 8567 | + | 4.A.1.1.11 |
Gene ID: k141_12851_4
Type: CAZyme
Location: 2318 - 6091 (+)
Type: CAZyme
Location: 2318 - 6091 (+)
Gene ID: k141_12851_5
Type: pfam
Location: 6101 - 6892 (+)
Type: pfam
Location: 6101 - 6892 (+)
Gene ID: k141_12851_6
Type: TC
Location: 6903 - 8567 (+)
Type: TC
Location: 6903 - 8567 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_12851_6 | vegan > omnivore | 1.03848 | 0.00918 |