Cluster: CGMR094357_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR094357
- CGC Family ID: CGCFAM_00784
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4321 | k141_4321_2 | 176 | 622 | + | 1.B.40.1.5 |
| pfam | k141_4321 | k141_4321_3 | 755 | 1891 | + | DUF2827 |
| CAZyme | k141_4321 | k141_4321_4 | 1926 | 3113 | - | GT4 |
| CAZyme | k141_4321 | k141_4321_5 | 3133 | 4674 | - | GT2 |
| TC | k141_4321 | k141_4321_6 | 4683 | 5870 | - | 2.A.33.1.2 |
| TC | k141_4321 | k141_4321_7 | 6073 | 7374 | + | 2.A.26.1.1 |
Gene ID: k141_4321_2
Type: TC
Location: 176 - 622 (+)
Type: TC
Location: 176 - 622 (+)
Gene ID: k141_4321_3
Type: pfam
Location: 755 - 1891 (+)
Type: pfam
Location: 755 - 1891 (+)
Gene ID: k141_4321_4
Type: CAZyme
Location: 1926 - 3113 (-)
Type: CAZyme
Location: 1926 - 3113 (-)
Gene ID: k141_4321_5
Type: CAZyme
Location: 3133 - 4674 (-)
Type: CAZyme
Location: 3133 - 4674 (-)
Gene ID: k141_4321_6
Type: TC
Location: 4683 - 5870 (-)
Type: TC
Location: 4683 - 5870 (-)
Gene ID: k141_4321_7
Type: TC
Location: 6073 - 7374 (+)
Type: TC
Location: 6073 - 7374 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.