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Cluster: CGMR094357_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_17028 k141_17028_48 53298 55553 - 1.B.14.1.3
TC k141_17028 k141_17028_49 55795 56502 + 2.A.88.8.6
TC k141_17028 k141_17028_50 56517 57833 + 2.A.1.15.11
peptidase k141_17028 k141_17028_51 58055 58882 + C44.UPW
STP k141_17028 k141_17028_52 58951 60321 - Pyr_redox_2
CAZyme k141_17028 k141_17028_53 60385 61245 - GT8
TC k141_17028 k141_17028_54 61365 63629 - 1.B.40.2.2
Gene ID: k141_17028_48
Type: TC
Location: 53298 - 55553 (-)
Gene ID: k141_17028_49
Type: TC
Location: 55795 - 56502 (+)
Gene ID: k141_17028_50
Type: TC
Location: 56517 - 57833 (+)
Gene ID: k141_17028_51
Type: peptidase
Location: 58055 - 58882 (+)
Gene ID: k141_17028_52
Type: STP
Location: 58951 - 60321 (-)
Gene ID: k141_17028_53
Type: CAZyme
Location: 60385 - 61245 (-)
Gene ID: k141_17028_54
Type: TC
Location: 61365 - 63629 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_17028_51 vegan > omnivore 1.51878 0.00918
k141_17028_51 vegetarian > omnivore 1.03118 0.00397
k141_17028_52 vegan > omnivore 1.13690 0.00918
k141_17028_52 vegetarian > omnivore 1.25654 0.00397

🧭 Explore Read Mapping of CGC

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