dbCAN HGM

Cluster: CGMR094357_CGC17

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	k141_24678	k141_24678_8	7209	8387	+	2.A.1.2.18
TC	k141_24678	k141_24678_9	8428	9411	-	3.A.1.5.27
TC	k141_24678	k141_24678_10	9404	10387	-	3.A.1.5.27
TC	k141_24678	k141_24678_11	10396	11292	-	3.A.1.5.27
TC	k141_24678	k141_24678_12	11305	12309	-	3.A.1.5.27
pfam	k141_24678	k141_24678_13	12419	14596	-	UvrD-helicase \| AAA_19 \| UvrD_C \| UvrD_C_2 \| PcrA_UvrD_tudor
TC	k141_24678	k141_24678_14	14745	15791	+	3.A.1.20.2
CAZyme	k141_24678	k141_24678_15	15851	16768	-	GT8
pfam	k141_24678	k141_24678_16	16840	17643	-	FdhD-NarQ
TC	k141_24678	k141_24678_17	17919	18530	+	5.A.3.2.1
TC	k141_24678	k141_24678_18	18579	21002	+	5.A.3.2.1
TC	k141_24678	k141_24678_19	21004	21939	+	5.A.3.2.1
TC	k141_24678	k141_24678_20	21932	22648	+	5.A.3.2.1

Gene ID: k141_24678_8
Type: TC
Location: 7209 - 8387 (+)

Gene ID: k141_24678_9
Type: TC
Location: 8428 - 9411 (-)

Gene ID: k141_24678_10
Type: TC
Location: 9404 - 10387 (-)

Gene ID: k141_24678_11
Type: TC
Location: 10396 - 11292 (-)

Gene ID: k141_24678_12
Type: TC
Location: 11305 - 12309 (-)

Gene ID: k141_24678_13
Type: pfam
Location: 12419 - 14596 (-)

Gene ID: k141_24678_14
Type: TC
Location: 14745 - 15791 (+)

Gene ID: k141_24678_15
Type: CAZyme
Location: 15851 - 16768 (-)

Gene ID: k141_24678_16
Type: pfam
Location: 16840 - 17643 (-)

Gene ID: k141_24678_17
Type: TC
Location: 17919 - 18530 (+)

Gene ID: k141_24678_18
Type: TC
Location: 18579 - 21002 (+)

Gene ID: k141_24678_19
Type: TC
Location: 21004 - 21939 (+)

Gene ID: k141_24678_20
Type: TC
Location: 21932 - 22648 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
k141_24678_9	vegan > omnivore	1.44653	0.00918
k141_24678_11	vegan > omnivore	1.02135	0.00918
k141_24678_17	vegan > omnivore	1.09934	0.00918
k141_24678_18	vegan > omnivore	1.21641	0.00918

Gene ID	Condition Pair	log2FC	FDR P-value
k141_24678_11	vegan > omnivore	1.62273	0.00614
k141_24678_14	vegan > omnivore	1.17594	0.00614
k141_24678_17	vegan > flexitarian	1.06701	0.02820
k141_24678_18	vegan > omnivore	1.06653	0.00614
k141_24678_20	vegan > omnivore	2.84026	0.00614

Gene ID	Condition Pair	log2FC	FDR P-value
k141_24678_8	nonIBD > CD	18.61374	0.00082
k141_24678_8	UC > CD	18.73366	0.00027
k141_24678_9	nonIBD > CD	2.50841	0.00082
k141_24678_9	UC > CD	3.68107	0.00027
k141_24678_12	nonIBD > CD	2.52034	0.00082
k141_24678_12	UC > CD	1.85352	0.00027
k141_24678_17	UC > CD	1.69860	0.00027
k141_24678_18	UC > CD	1.15551	0.00027
k141_24678_19	UC > CD	5.07191	0.00027
k141_24678_19	nonIBD > CD	3.25267	0.00082
k141_24678_20	UC > CD	20.12370	0.00027
k141_24678_20	nonIBD > CD	18.80364	0.00082