Cluster: CGMR094357_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR094357
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_32541 | k141_32541_1 | 2 | 616 | - | 3.A.1.122.8 |
| pfam | k141_32541 | k141_32541_2 | 618 | 1751 | - | FtsX | MacB_PCD |
| TC | k141_32541 | k141_32541_3 | 1738 | 3078 | - | 3.A.1.122.8 |
| pfam | k141_32541 | k141_32541_4 | 3078 | 4472 | - | YHS | FtrD-like |
| TC | k141_32541 | k141_32541_5 | 4588 | 5109 | - | 2.A.108.2.10 |
| TC | k141_32541 | k141_32541_6 | 5138 | 7042 | - | 2.A.108.2.10 |
| CAZyme | k141_32541 | k141_32541_7 | 7262 | 9661 | - | GT51 |
Gene ID: k141_32541_1
Type: TC
Location: 2 - 616 (-)
Type: TC
Location: 2 - 616 (-)
Gene ID: k141_32541_2
Type: pfam
Location: 618 - 1751 (-)
Type: pfam
Location: 618 - 1751 (-)
Gene ID: k141_32541_3
Type: TC
Location: 1738 - 3078 (-)
Type: TC
Location: 1738 - 3078 (-)
Gene ID: k141_32541_4
Type: pfam
Location: 3078 - 4472 (-)
Type: pfam
Location: 3078 - 4472 (-)
Gene ID: k141_32541_5
Type: TC
Location: 4588 - 5109 (-)
Type: TC
Location: 4588 - 5109 (-)
Gene ID: k141_32541_6
Type: TC
Location: 5138 - 7042 (-)
Type: TC
Location: 5138 - 7042 (-)
Gene ID: k141_32541_7
Type: CAZyme
Location: 7262 - 9661 (-)
Type: CAZyme
Location: 7262 - 9661 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_32541_4 | vegetarian > vegan | 1.76802 | 0.01056 |
| k141_32541_6 | vegetarian > vegan | 1.13377 | 0.01056 |