Cluster: CGMR094357_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR094357
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_50369 | k141_50369_14 | 14846 | 15964 | - | 1.B.1.3.3 |
| CAZyme | k141_50369 | k141_50369_15 | 16130 | 17083 | - | GT9 |
| TC | k141_50369 | k141_50369_16 | 17080 | 17985 | - | 2.A.7.3.58 |
| CAZyme | k141_50369 | k141_50369_17 | 17982 | 19025 | - | GT9 |
Gene ID: k141_50369_14
Type: TC
Location: 14846 - 15964 (-)
Type: TC
Location: 14846 - 15964 (-)
Gene ID: k141_50369_15
Type: CAZyme
Location: 16130 - 17083 (-)
Type: CAZyme
Location: 16130 - 17083 (-)
Gene ID: k141_50369_16
Type: TC
Location: 17080 - 17985 (-)
Type: TC
Location: 17080 - 17985 (-)
Gene ID: k141_50369_17
Type: CAZyme
Location: 17982 - 19025 (-)
Type: CAZyme
Location: 17982 - 19025 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_50369_15 | vegan > omnivore | 1.37891 | 0.00918 |
| k141_50369_15 | vegetarian > omnivore | 1.85945 | 0.00397 |