Cluster: CGMR094357_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR094357
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_51569 | k141_51569_23 | 25103 | 27121 | - | GT41 |
| pfam | k141_51569 | k141_51569_24 | 27161 | 28498 | - | UPF0004 | Radical_SAM | TRAM_2 |
| TC | k141_51569 | k141_51569_25 | 28665 | 29381 | + | 9.B.20.2.2 |
Gene ID: k141_51569_23
Type: CAZyme
Location: 25103 - 27121 (-)
Type: CAZyme
Location: 25103 - 27121 (-)
Gene ID: k141_51569_24
Type: pfam
Location: 27161 - 28498 (-)
Type: pfam
Location: 27161 - 28498 (-)
Gene ID: k141_51569_25
Type: TC
Location: 28665 - 29381 (+)
Type: TC
Location: 28665 - 29381 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_51569_25 | vegetarian > omnivore | 1.12935 | 0.00397 |