Cluster: CGMR094357_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR094357
- CGC Family ID: CGCFAM_00029
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_42378 | k141_42378_58 | 57195 | 59090 | - | 9.B.18.2.1 |
| TC | k141_42378 | k141_42378_59 | 59128 | 59715 | - | 9.B.18.1.3 |
| pfam | k141_42378 | k141_42378_60 | 59718 | 60929 | - | Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP |
| CAZyme | k141_42378 | k141_42378_61 | 60943 | 61758 | - | GT2 |
| pfam | k141_42378 | k141_42378_62 | 61773 | 62867 | - | EpsG |
| CAZyme | k141_42378 | k141_42378_63 | 62867 | 63811 | - | GT52 |
Gene ID: k141_42378_58
Type: TC
Location: 57195 - 59090 (-)
Type: TC
Location: 57195 - 59090 (-)
Gene ID: k141_42378_59
Type: TC
Location: 59128 - 59715 (-)
Type: TC
Location: 59128 - 59715 (-)
Gene ID: k141_42378_60
Type: pfam
Location: 59718 - 60929 (-)
Type: pfam
Location: 59718 - 60929 (-)
Gene ID: k141_42378_61
Type: CAZyme
Location: 60943 - 61758 (-)
Type: CAZyme
Location: 60943 - 61758 (-)
Gene ID: k141_42378_62
Type: pfam
Location: 61773 - 62867 (-)
Type: pfam
Location: 61773 - 62867 (-)
Gene ID: k141_42378_63
Type: CAZyme
Location: 62867 - 63811 (-)
Type: CAZyme
Location: 62867 - 63811 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.