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Cluster: CGMR094083_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1567 k141_1567_34 35441 37432 + 3.A.2.2.2
TC k141_1567 k141_1567_35 37429 37893 + 3.A.2.2.2
TC k141_1567 k141_1567_36 37909 38493 + 3.A.2.2.2
TC k141_1567 k141_1567_37 38509 39501 + 3.A.2.2.2
TC k141_1567 k141_1567_38 39491 39802 + 3.A.2.2.2
TC k141_1567 k141_1567_39 40174 41955 + 3.A.2.2.2
TC k141_1567 k141_1567_40 41948 43327 + 3.A.2.2.2
TC k141_1567 k141_1567_41 43333 43962 + 3.A.2.2.2
TC k141_1567 k141_1567_42 44157 45518 + 2.A.38.4.1
TC k141_1567 k141_1567_43 45724 46668 + 3.A.1.1.10
TC k141_1567 k141_1567_44 46681 47607 + 3.A.1.1.29
STP k141_1567 k141_1567_45 47677 49146 + SBP_bac_1
pfam k141_1567 k141_1567_46 49219 49854 + DUF624
TC k141_1567 k141_1567_47 49868 51553 + 8.A.59.2.1
TF k141_1567 k141_1567_48 51546 53024 + HTH_AraC | HTH_AraC
pfam k141_1567 k141_1567_49 53062 53916 + ROK
CAZyme k141_1567 k141_1567_50 54050 56194 - GH92
TF k141_1567 k141_1567_51 56187 57221 - GntR
CAZyme k141_1567 k141_1567_52 57368 58654 + GH125
CAZyme k141_1567 k141_1567_53 58673 61351 + GH38
CAZyme k141_1567 k141_1567_54 61372 62721 + GH20
CAZyme k141_1567 k141_1567_55 62741 64141 + GH1
NULL(UNKNOWN) k141_1567 k141_1567_56 64228 64455 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_1567 k141_1567_57 64502 65218 - GntR
TC k141_1567 k141_1567_58 65554 67557 + 4.A.1.2.13
TC k141_1567 k141_1567_59 67767 68951 + 2.A.41.1.2
pfam k141_1567 k141_1567_60 69165 70001 + PRD | PRD | CAT_RBD
TC k141_1567 k141_1567_61 70100 71971 + 4.A.1.2.2
CAZyme k141_1567 k141_1567_62 71990 73438 + GH1
pfam k141_1567 k141_1567_63 73614 74588 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
TC k141_1567 k141_1567_64 74639 76015 - 2.A.3.1.16
TC k141_1567 k141_1567_65 76280 77653 + 2.A.3.3.22
Gene ID: k141_1567_34
Type: TC
Location: 35441 - 37432 (+)
Gene ID: k141_1567_35
Type: TC
Location: 37429 - 37893 (+)
Gene ID: k141_1567_36
Type: TC
Location: 37909 - 38493 (+)
Gene ID: k141_1567_37
Type: TC
Location: 38509 - 39501 (+)
Gene ID: k141_1567_38
Type: TC
Location: 39491 - 39802 (+)
Gene ID: k141_1567_39
Type: TC
Location: 40174 - 41955 (+)
Gene ID: k141_1567_40
Type: TC
Location: 41948 - 43327 (+)
Gene ID: k141_1567_41
Type: TC
Location: 43333 - 43962 (+)
Gene ID: k141_1567_42
Type: TC
Location: 44157 - 45518 (+)
Gene ID: k141_1567_43
Type: TC
Location: 45724 - 46668 (+)
Gene ID: k141_1567_44
Type: TC
Location: 46681 - 47607 (+)
Gene ID: k141_1567_45
Type: STP
Location: 47677 - 49146 (+)
Gene ID: k141_1567_46
Type: pfam
Location: 49219 - 49854 (+)
Gene ID: k141_1567_47
Type: TC
Location: 49868 - 51553 (+)
Gene ID: k141_1567_48
Type: TF
Location: 51546 - 53024 (+)
Gene ID: k141_1567_49
Type: pfam
Location: 53062 - 53916 (+)
Gene ID: k141_1567_50
Type: CAZyme
Location: 54050 - 56194 (-)
Gene ID: k141_1567_51
Type: TF
Location: 56187 - 57221 (-)
Gene ID: k141_1567_52
Type: CAZyme
Location: 57368 - 58654 (+)
Gene ID: k141_1567_53
Type: CAZyme
Location: 58673 - 61351 (+)
Gene ID: k141_1567_54
Type: CAZyme
Location: 61372 - 62721 (+)
Gene ID: k141_1567_55
Type: CAZyme
Location: 62741 - 64141 (+)
Gene ID: k141_1567_56
Type:
Location: 64228 - 64455 (+)
Gene ID: k141_1567_57
Type: TF
Location: 64502 - 65218 (-)
Gene ID: k141_1567_58
Type: TC
Location: 65554 - 67557 (+)
Gene ID: k141_1567_59
Type: TC
Location: 67767 - 68951 (+)
Gene ID: k141_1567_60
Type: pfam
Location: 69165 - 70001 (+)
Gene ID: k141_1567_61
Type: TC
Location: 70100 - 71971 (+)
Gene ID: k141_1567_62
Type: CAZyme
Location: 71990 - 73438 (+)
Gene ID: k141_1567_63
Type: pfam
Location: 73614 - 74588 (+)
Gene ID: k141_1567_64
Type: TC
Location: 74639 - 76015 (-)
Gene ID: k141_1567_65
Type: TC
Location: 76280 - 77653 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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