Cluster: CGMR094083_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR094083
- CGC Family ID: CGCFAM_04606
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_75510 | k141_75510_12 | 9936 | 11099 | + | 2.A.1.64.1 |
| pfam | k141_75510 | k141_75510_13 | 11578 | 15180 | + | RNA_pol_Rpb2_6 | RNA_pol_Rpb2_7 | RNA_pol_Rpb2_2 | RNA_pol_Rpb2_2 | RNA_pol_Rpb2_1 | RNA_pol_Rpb2_3 | RNA_pol_Rpb2_45 |
| pfam | k141_75510 | k141_75510_14 | 15297 | 18953 | + | RNA_pol_Rpb1_2 | RNA_pol_Rpb1_3 | RNA_pol_Rpb1_1 | RNA_pol_Rpb1_5 | RNA_pol_Rpb1_4 |
| CAZyme | k141_75510 | k141_75510_15 | 19156 | 20166 | + | GT2 |
Gene ID: k141_75510_12
Type: TC
Location: 9936 - 11099 (+)
Type: TC
Location: 9936 - 11099 (+)
Gene ID: k141_75510_13
Type: pfam
Location: 11578 - 15180 (+)
Type: pfam
Location: 11578 - 15180 (+)
Gene ID: k141_75510_14
Type: pfam
Location: 15297 - 18953 (+)
Type: pfam
Location: 15297 - 18953 (+)
Gene ID: k141_75510_15
Type: CAZyme
Location: 19156 - 20166 (+)
Type: CAZyme
Location: 19156 - 20166 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_E
Species
Enterococcus_E cecorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.