Cluster: CGMR093505_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR093505
- CGC Family ID: CGCFAM_03790
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_5543 | k141_5543_12 | 8167 | 10242 | + | 1.B.52.2.2 |
| TC | k141_5543 | k141_5543_13 | 10605 | 12719 | + | 1.B.52.2.2 |
| NULL(UNKNOWN) | k141_5543 | k141_5543_14 | 12799 | 12990 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_5543 | k141_5543_15 | 13051 | 14286 | - | GT4 |
| pfam | k141_5543 | k141_5543_16 | 14299 | 15381 | - | Epimerase_2 |
| CAZyme | k141_5543 | k141_5543_17 | 15378 | 16496 | - | GH177 |
Gene ID: k141_5543_12
Type: TC
Location: 8167 - 10242 (+)
Type: TC
Location: 8167 - 10242 (+)
Gene ID: k141_5543_13
Type: TC
Location: 10605 - 12719 (+)
Type: TC
Location: 10605 - 12719 (+)
Gene ID: k141_5543_14
Type:
Location: 12799 - 12990 (-)
Type:
Location: 12799 - 12990 (-)
Gene ID: k141_5543_15
Type: CAZyme
Location: 13051 - 14286 (-)
Type: CAZyme
Location: 13051 - 14286 (-)
Gene ID: k141_5543_16
Type: pfam
Location: 14299 - 15381 (-)
Type: pfam
Location: 14299 - 15381 (-)
Gene ID: k141_5543_17
Type: CAZyme
Location: 15378 - 16496 (-)
Type: CAZyme
Location: 15378 - 16496 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_E
Species
Clostridium_E sporosphaeroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.