Cluster: CGMR093505_CGC19
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR093505
- CGC Family ID: CGCFAM_03610
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_12166 | k141_12166_76 | 67988 | 68998 | - | 9.A.11.1.1 |
| TC | k141_12166 | k141_12166_77 | 69011 | 69490 | - | 9.A.11.1.1 |
| pfam | k141_12166 | k141_12166_78 | 69830 | 71338 | - | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| TC | k141_12166 | k141_12166_79 | 71569 | 72246 | + | 3.A.1.122.14 |
| NULL(UNKNOWN) | k141_12166 | k141_12166_80 | 72336 | 72587 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_12166 | k141_12166_81 | 72695 | 73693 | + | 3.A.11.1.4 |
| TC | k141_12166 | k141_12166_82 | 73962 | 74810 | - | 3.A.1.3.14 |
| NULL(UNKNOWN) | k141_12166 | k141_12166_83 | 74987 | 75970 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_12166 | k141_12166_84 | 76470 | 77795 | - | GH1 |
| CAZyme | k141_12166 | k141_12166_85 | 77905 | 80337 | - | GH94 |
| TF | k141_12166 | k141_12166_86 | 81026 | 82033 | + | LacI |
| NULL(UNKNOWN) | k141_12166 | k141_12166_87 | 82135 | 83526 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_12166 | k141_12166_88 | 83645 | 84634 | + | 3.A.1.1.4 |
| TC | k141_12166 | k141_12166_89 | 84631 | 85494 | + | 3.A.1.1.48 |
Gene ID: k141_12166_76
Type: TC
Location: 67988 - 68998 (-)
Type: TC
Location: 67988 - 68998 (-)
Gene ID: k141_12166_77
Type: TC
Location: 69011 - 69490 (-)
Type: TC
Location: 69011 - 69490 (-)
Gene ID: k141_12166_78
Type: pfam
Location: 69830 - 71338 (-)
Type: pfam
Location: 69830 - 71338 (-)
Gene ID: k141_12166_79
Type: TC
Location: 71569 - 72246 (+)
Type: TC
Location: 71569 - 72246 (+)
Gene ID: k141_12166_80
Type:
Location: 72336 - 72587 (+)
Type:
Location: 72336 - 72587 (+)
Gene ID: k141_12166_81
Type: TC
Location: 72695 - 73693 (+)
Type: TC
Location: 72695 - 73693 (+)
Gene ID: k141_12166_82
Type: TC
Location: 73962 - 74810 (-)
Type: TC
Location: 73962 - 74810 (-)
Gene ID: k141_12166_83
Type:
Location: 74987 - 75970 (-)
Type:
Location: 74987 - 75970 (-)
Gene ID: k141_12166_84
Type: CAZyme
Location: 76470 - 77795 (-)
Type: CAZyme
Location: 76470 - 77795 (-)
Gene ID: k141_12166_85
Type: CAZyme
Location: 77905 - 80337 (-)
Type: CAZyme
Location: 77905 - 80337 (-)
Gene ID: k141_12166_86
Type: TF
Location: 81026 - 82033 (+)
Type: TF
Location: 81026 - 82033 (+)
Gene ID: k141_12166_87
Type:
Location: 82135 - 83526 (+)
Type:
Location: 82135 - 83526 (+)
Gene ID: k141_12166_88
Type: TC
Location: 83645 - 84634 (+)
Type: TC
Location: 83645 - 84634 (+)
Gene ID: k141_12166_89
Type: TC
Location: 84631 - 85494 (+)
Type: TC
Location: 84631 - 85494 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_E
Species
Clostridium_E sporosphaeroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.