Cluster: CGMR093328_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR093328
- CGC Family ID: CGCFAM_05414
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_10565 | k141_10565_2 | 1640 | 2422 | + | GT2 |
| pfam | k141_10565 | k141_10565_3 | 2423 | 2788 | - | RbpA |
| pfam | k141_10565 | k141_10565_4 | 2953 | 3696 | + | PAP2_3 |
| TC | k141_10565 | k141_10565_5 | 3730 | 5244 | + | 1.A.33.1.4 |
Gene ID: k141_10565_2
Type: CAZyme
Location: 1640 - 2422 (+)
Type: CAZyme
Location: 1640 - 2422 (+)
Gene ID: k141_10565_3
Type: pfam
Location: 2423 - 2788 (-)
Type: pfam
Location: 2423 - 2788 (-)
Gene ID: k141_10565_4
Type: pfam
Location: 2953 - 3696 (+)
Type: pfam
Location: 2953 - 3696 (+)
Gene ID: k141_10565_5
Type: TC
Location: 3730 - 5244 (+)
Type: TC
Location: 3730 - 5244 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia variabilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.