Cluster: CGMR093181_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR093181
- CGC Family ID: CGCFAM_00022
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_192794 | k141_192794_8 | 9343 | 9948 | - | 9.B.18.1.2 |
| CAZyme | k141_192794 | k141_192794_9 | 9929 | 11080 | - | GT4 |
| NULL(UNKNOWN) | k141_192794 | k141_192794_10 | 11190 | 11666 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_192794 | k141_192794_11 | 11667 | 12446 | + | PHP |
| TC | k141_192794 | k141_192794_12 | 12484 | 12765 | - | 3.A.6.2.1 |
Gene ID: k141_192794_8
Type: TC
Location: 9343 - 9948 (-)
Type: TC
Location: 9343 - 9948 (-)
Gene ID: k141_192794_9
Type: CAZyme
Location: 9929 - 11080 (-)
Type: CAZyme
Location: 9929 - 11080 (-)
Gene ID: k141_192794_10
Type:
Location: 11190 - 11666 (+)
Type:
Location: 11190 - 11666 (+)
Gene ID: k141_192794_11
Type: pfam
Location: 11667 - 12446 (+)
Type: pfam
Location: 11667 - 12446 (+)
Gene ID: k141_192794_12
Type: TC
Location: 12484 - 12765 (-)
Type: TC
Location: 12484 - 12765 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_D
Species
Helicobacter_D colisuis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.