Cluster: CGMR093181_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR093181
- CGC Family ID: CGCFAM_09140
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_89593 | k141_89593_124 | 129836 | 130693 | - | 1.A.23.2.2 |
| peptidase | k141_89593 | k141_89593_125 | 130693 | 131904 | - | M38.UNW |
| CAZyme | k141_89593 | k141_89593_126 | 131973 | 133049 | - | GT9 |
| pfam | k141_89593 | k141_89593_127 | 133046 | 133954 | - | Lip_A_acyltrans |
| CAZyme | k141_89593 | k141_89593_128 | 133951 | 134952 | - | GT9 |
Gene ID: k141_89593_124
Type: TC
Location: 129836 - 130693 (-)
Type: TC
Location: 129836 - 130693 (-)
Gene ID: k141_89593_125
Type: peptidase
Location: 130693 - 131904 (-)
Type: peptidase
Location: 130693 - 131904 (-)
Gene ID: k141_89593_126
Type: CAZyme
Location: 131973 - 133049 (-)
Type: CAZyme
Location: 131973 - 133049 (-)
Gene ID: k141_89593_127
Type: pfam
Location: 133046 - 133954 (-)
Type: pfam
Location: 133046 - 133954 (-)
Gene ID: k141_89593_128
Type: CAZyme
Location: 133951 - 134952 (-)
Type: CAZyme
Location: 133951 - 134952 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_D
Species
Helicobacter_D colisuis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.