Cluster: CGMR093181_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR093181
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_38621 | k141_38621_13 | 11470 | 12369 | + | 3.A.1.4.10 |
| TC | k141_38621 | k141_38621_14 | 12386 | 13585 | + | 3.A.1.4.8 |
| TC | k141_38621 | k141_38621_15 | 13585 | 14358 | + | 3.A.1.4.10 |
| TC | k141_38621 | k141_38621_16 | 14345 | 15040 | + | 3.A.1.4.10 |
| pfam | k141_38621 | k141_38621_17 | 15162 | 15581 | + | Ribosomal_L13 |
| pfam | k141_38621 | k141_38621_18 | 15591 | 15980 | + | Ribosomal_S9 |
| CAZyme | k141_38621 | k141_38621_19 | 15934 | 18036 | + | GT66 |
Gene ID: k141_38621_13
Type: TC
Location: 11470 - 12369 (+)
Type: TC
Location: 11470 - 12369 (+)
Gene ID: k141_38621_14
Type: TC
Location: 12386 - 13585 (+)
Type: TC
Location: 12386 - 13585 (+)
Gene ID: k141_38621_15
Type: TC
Location: 13585 - 14358 (+)
Type: TC
Location: 13585 - 14358 (+)
Gene ID: k141_38621_16
Type: TC
Location: 14345 - 15040 (+)
Type: TC
Location: 14345 - 15040 (+)
Gene ID: k141_38621_17
Type: pfam
Location: 15162 - 15581 (+)
Type: pfam
Location: 15162 - 15581 (+)
Gene ID: k141_38621_18
Type: pfam
Location: 15591 - 15980 (+)
Type: pfam
Location: 15591 - 15980 (+)
Gene ID: k141_38621_19
Type: CAZyme
Location: 15934 - 18036 (+)
Type: CAZyme
Location: 15934 - 18036 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_D
Species
Helicobacter_D colisuis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.