Cluster: CGMR093181_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR093181
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_33415 | k141_33415_33 | 30397 | 32103 | + | 3.A.1.106.15 |
| CAZyme | k141_33415 | k141_33415_34 | 32131 | 33060 | + | GT2 |
| CAZyme | k141_33415 | k141_33415_35 | 33057 | 34175 | + | GT4 |
| CAZyme | k141_33415 | k141_33415_36 | 34166 | 35308 | + | GT4 |
Gene ID: k141_33415_33
Type: TC
Location: 30397 - 32103 (+)
Type: TC
Location: 30397 - 32103 (+)
Gene ID: k141_33415_34
Type: CAZyme
Location: 32131 - 33060 (+)
Type: CAZyme
Location: 32131 - 33060 (+)
Gene ID: k141_33415_35
Type: CAZyme
Location: 33057 - 34175 (+)
Type: CAZyme
Location: 33057 - 34175 (+)
Gene ID: k141_33415_36
Type: CAZyme
Location: 34166 - 35308 (+)
Type: CAZyme
Location: 34166 - 35308 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_D
Species
Helicobacter_D colisuis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.