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Cluster: CGMR093109_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_248010 k141_248010_3 2004 4154 - 1.B.52.2.2
TF k141_248010 k141_248010_4 4296 5822 - HTH_AraC | HTH_AraC
TC k141_248010 k141_248010_5 5858 6910 - 8.A.59.2.1
CAZyme k141_248010 k141_248010_6 6937 9228 - GH95
pfam k141_248010 k141_248010_7 9534 10631 + Aldo_ket_red | Fer4_17
TC k141_248010 k141_248010_8 10778 12424 + 3.A.1.121.4
NULL(UNKNOWN) k141_248010 k141_248010_9 12517 13260 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_248010 k141_248010_10 13410 14249 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_248010 k141_248010_11 14306 15478 - GH13_18
Gene ID: k141_248010_3
Type: TC
Location: 2004 - 4154 (-)
Gene ID: k141_248010_4
Type: TF
Location: 4296 - 5822 (-)
Gene ID: k141_248010_5
Type: TC
Location: 5858 - 6910 (-)
Gene ID: k141_248010_6
Type: CAZyme
Location: 6937 - 9228 (-)
Gene ID: k141_248010_7
Type: pfam
Location: 9534 - 10631 (+)
Gene ID: k141_248010_8
Type: TC
Location: 10778 - 12424 (+)
Gene ID: k141_248010_9
Type:
Location: 12517 - 13260 (+)
Gene ID: k141_248010_10
Type:
Location: 13410 - 14249 (+)
Gene ID: k141_248010_11
Type: CAZyme
Location: 14306 - 15478 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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