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Cluster: CGMR093109_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_505485 k141_505485_12 14426 15709 - GH18
pfam k141_505485 k141_505485_13 15853 16380 + Flavin_Reduct
pfam k141_505485 k141_505485_14 16433 17038 - Zn_dep_PLPC
TC k141_505485 k141_505485_15 17267 18556 + 9.A.40.2.4
pfam k141_505485 k141_505485_16 18817 19362 + GSHPx
NULL(UNKNOWN) k141_505485 k141_505485_17 19357 19791 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_505485 k141_505485_18 19851 21473 - CE20
CAZyme k141_505485 k141_505485_19 21540 23726 - GH36
peptidase k141_505485 k141_505485_20 23841 24755 - S09.UPW
pfam k141_505485 k141_505485_21 24772 25062 - Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10
CAZyme k141_505485 k141_505485_22 25119 26318 - GH1
pfam k141_505485 k141_505485_23 26373 26927 - Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10
CAZyme k141_505485 k141_505485_24 26985 28373 - GH4
Gene ID: k141_505485_12
Type: CAZyme
Location: 14426 - 15709 (-)
Gene ID: k141_505485_13
Type: pfam
Location: 15853 - 16380 (+)
Gene ID: k141_505485_14
Type: pfam
Location: 16433 - 17038 (-)
Gene ID: k141_505485_15
Type: TC
Location: 17267 - 18556 (+)
Gene ID: k141_505485_16
Type: pfam
Location: 18817 - 19362 (+)
Gene ID: k141_505485_17
Type:
Location: 19357 - 19791 (-)
Gene ID: k141_505485_18
Type: CAZyme
Location: 19851 - 21473 (-)
Gene ID: k141_505485_19
Type: CAZyme
Location: 21540 - 23726 (-)
Gene ID: k141_505485_20
Type: peptidase
Location: 23841 - 24755 (-)
Gene ID: k141_505485_21
Type: pfam
Location: 24772 - 25062 (-)
Gene ID: k141_505485_22
Type: CAZyme
Location: 25119 - 26318 (-)
Gene ID: k141_505485_23
Type: pfam
Location: 26373 - 26927 (-)
Gene ID: k141_505485_24
Type: CAZyme
Location: 26985 - 28373 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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