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Cluster: CGMR093109_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_544297 k141_544297_3 4018 4887 - 3.D.6.1.3
TC k141_544297 k141_544297_4 4904 5494 - 3.D.6.1.2
TC k141_544297 k141_544297_5 5500 6216 - 3.D.6.1.2
TC k141_544297 k141_544297_6 6209 6865 - 3.D.6.1.3
TC k141_544297 k141_544297_7 6858 7850 - 3.D.6.1.2
TC k141_544297 k141_544297_8 7900 9243 - 3.D.6.1.2
pfam k141_544297 k141_544297_9 9465 9725 - SpoIIID
CAZyme k141_544297 k141_544297_10 9962 10984 - GH130_2
STP k141_544297 k141_544297_11 11038 12516 - SBP_bac_1
pfam k141_544297 k141_544297_12 12580 14523 - CBM65_1 | CBM65_1 | CBM65_1
TC k141_544297 k141_544297_13 14622 15617 - 3.A.1.1.11
Gene ID: k141_544297_3
Type: TC
Location: 4018 - 4887 (-)
Gene ID: k141_544297_4
Type: TC
Location: 4904 - 5494 (-)
Gene ID: k141_544297_5
Type: TC
Location: 5500 - 6216 (-)
Gene ID: k141_544297_6
Type: TC
Location: 6209 - 6865 (-)
Gene ID: k141_544297_7
Type: TC
Location: 6858 - 7850 (-)
Gene ID: k141_544297_8
Type: TC
Location: 7900 - 9243 (-)
Gene ID: k141_544297_9
Type: pfam
Location: 9465 - 9725 (-)
Gene ID: k141_544297_10
Type: CAZyme
Location: 9962 - 10984 (-)
Gene ID: k141_544297_11
Type: STP
Location: 11038 - 12516 (-)
Gene ID: k141_544297_12
Type: pfam
Location: 12580 - 14523 (-)
Gene ID: k141_544297_13
Type: TC
Location: 14622 - 15617 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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