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Cluster: CGMR093109_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_564150 k141_564150_2 1017 2669 + 1.A.13.2.3
NULL(UNKNOWN) k141_564150 k141_564150_3 2774 3847 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_564150 k141_564150_4 3823 4734 - 3.A.1.132.6
TF k141_564150 k141_564150_5 4727 5116 - GntR
CAZyme k141_564150 k141_564150_6 5304 8228 + GH94
TF k141_564150 k141_564150_7 8365 9432 + HTH_AraC | HTH_AraC
TC k141_564150 k141_564150_8 9407 11155 + 8.A.59.2.1
Gene ID: k141_564150_2
Type: TC
Location: 1017 - 2669 (+)
Gene ID: k141_564150_3
Type:
Location: 2774 - 3847 (-)
Gene ID: k141_564150_4
Type: TC
Location: 3823 - 4734 (-)
Gene ID: k141_564150_5
Type: TF
Location: 4727 - 5116 (-)
Gene ID: k141_564150_6
Type: CAZyme
Location: 5304 - 8228 (+)
Gene ID: k141_564150_7
Type: TF
Location: 8365 - 9432 (+)
Gene ID: k141_564150_8
Type: TC
Location: 9407 - 11155 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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