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Cluster: CGMR093109_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_500008 k141_500008_1 1 2052 - GH146
TC k141_500008 k141_500008_2 2362 3000 + 3.A.1.139.2
TC k141_500008 k141_500008_3 2993 3766 + 3.A.1.139.2
pfam k141_500008 k141_500008_4 3828 4811 - GFO_IDH_MocA | Shikimate_DH | GFO_IDH_MocA_C | NAD_binding_3 | F420_oxidored | GFO_IDH_MocA_C3
TC k141_500008 k141_500008_5 5242 5760 + 2.A.66.1.43
pfam k141_500008 k141_500008_6 5872 6402 + MatE
TC k141_500008 k141_500008_7 6436 7290 + 3.A.11.1.4
pfam k141_500008 k141_500008_8 7396 7614 + DUF3006
TC k141_500008 k141_500008_9 7677 9353 - 3.A.1.106.2
Gene ID: k141_500008_1
Type: CAZyme
Location: 1 - 2052 (-)
Gene ID: k141_500008_2
Type: TC
Location: 2362 - 3000 (+)
Gene ID: k141_500008_3
Type: TC
Location: 2993 - 3766 (+)
Gene ID: k141_500008_4
Type: pfam
Location: 3828 - 4811 (-)
Gene ID: k141_500008_5
Type: TC
Location: 5242 - 5760 (+)
Gene ID: k141_500008_6
Type: pfam
Location: 5872 - 6402 (+)
Gene ID: k141_500008_7
Type: TC
Location: 6436 - 7290 (+)
Gene ID: k141_500008_8
Type: pfam
Location: 7396 - 7614 (+)
Gene ID: k141_500008_9
Type: TC
Location: 7677 - 9353 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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