dbCAN Logo

Cluster: CGMR093109_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_203349 k141_203349_1 123 1985 - 3.A.3.6.1
NULL(UNKNOWN) k141_203349 k141_203349_2 2074 2367 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_203349 k141_203349_3 2607 3839 - 3.A.1.111.4
pfam k141_203349 k141_203349_4 4003 4545 - DUF436
CAZyme k141_203349 k141_203349_5 4854 5237 + GH16_3
CAZyme k141_203349 k141_203349_6 5304 6098 + CBM92 | CBM92 | GH16_3
CAZyme k141_203349 k141_203349_7 6079 7548 - GH29
Gene ID: k141_203349_1
Type: TC
Location: 123 - 1985 (-)
Gene ID: k141_203349_2
Type:
Location: 2074 - 2367 (-)
Gene ID: k141_203349_3
Type: TC
Location: 2607 - 3839 (-)
Gene ID: k141_203349_4
Type: pfam
Location: 4003 - 4545 (-)
Gene ID: k141_203349_5
Type: CAZyme
Location: 4854 - 5237 (+)
Gene ID: k141_203349_6
Type: CAZyme
Location: 5304 - 6098 (+)
Gene ID: k141_203349_7
Type: CAZyme
Location: 6079 - 7548 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List