Cluster: CGMR092963_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR092963
- CGC Family ID: CGCFAM_00018
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_76 | k141_76_1 | 3 | 1172 | + | 9.B.18.1.3 |
| CAZyme | k141_76 | k141_76_2 | 1173 | 2399 | + | GT4 |
| TC | k141_76 | k141_76_3 | 2399 | 3433 | + | 9.B.18.2.1 |
| pfam | k141_76 | k141_76_4 | 3433 | 4539 | + | Epimerase | Polysacc_synt_2 | NAD_binding_4 | Polysacc_synt_C |
| pfam | k141_76 | k141_76_5 | 4541 | 5665 | + | Epimerase_2 |
| CAZyme | k141_76 | k141_76_6 | 5667 | 6782 | + | GT4 |
Gene ID: k141_76_1
Type: TC
Location: 3 - 1172 (+)
Type: TC
Location: 3 - 1172 (+)
Gene ID: k141_76_2
Type: CAZyme
Location: 1173 - 2399 (+)
Type: CAZyme
Location: 1173 - 2399 (+)
Gene ID: k141_76_3
Type: TC
Location: 2399 - 3433 (+)
Type: TC
Location: 2399 - 3433 (+)
Gene ID: k141_76_4
Type: pfam
Location: 3433 - 4539 (+)
Type: pfam
Location: 3433 - 4539 (+)
Gene ID: k141_76_5
Type: pfam
Location: 4541 - 5665 (+)
Type: pfam
Location: 4541 - 5665 (+)
Gene ID: k141_76_6
Type: CAZyme
Location: 5667 - 6782 (+)
Type: CAZyme
Location: 5667 - 6782 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A pullicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.