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Cluster: CGMR092924_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_275117 k141_275117_2 487 1614 + GH105
CAZyme k141_275117 k141_275117_3 1722 3881 + GH2
CAZyme k141_275117 k141_275117_4 3915 5432 + GH29
TC k141_275117 k141_275117_5 5597 8635 + 1.B.14.6.1
TC k141_275117 k141_275117_6 8647 10278 + 8.A.46.1.6
CAZyme k141_275117 k141_275117_7 10367 13543 + GH2
sulfatase k141_275117 k141_275117_8 14467 15795 + S1_14
pfam k141_275117 k141_275117_9 15865 16194 + rhaM
CAZyme k141_275117 k141_275117_10 16200 17189 - GT2
Gene ID: k141_275117_2
Type: CAZyme
Location: 487 - 1614 (+)
Gene ID: k141_275117_3
Type: CAZyme
Location: 1722 - 3881 (+)
Gene ID: k141_275117_4
Type: CAZyme
Location: 3915 - 5432 (+)
Gene ID: k141_275117_5
Type: TC
Location: 5597 - 8635 (+)
Gene ID: k141_275117_6
Type: TC
Location: 8647 - 10278 (+)
Gene ID: k141_275117_7
Type: CAZyme
Location: 10367 - 13543 (+)
Gene ID: k141_275117_8
Type: sulfatase
Location: 14467 - 15795 (+)
Gene ID: k141_275117_9
Type: pfam
Location: 15865 - 16194 (+)
Gene ID: k141_275117_10
Type: CAZyme
Location: 16200 - 17189 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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