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Cluster: CGMR092924_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_115769 k141_115769_22 23717 24784 + GT4
pfam k141_115769 k141_115769_23 24759 25718 + Stealth_CR2 | Stealth_CR1 | Stealth_CR4
pfam k141_115769 k141_115769_24 25730 26722 - Stealth_CR2 | Stealth_CR1 | Stealth_CR3 | Stealth_CR4
TC k141_115769 k141_115769_25 26752 27474 - 3.D.1.8.1
TC k141_115769 k141_115769_26 27544 28908 - 2.A.66.1.13
pfam k141_115769 k141_115769_27 29027 30088 - Chorismate_synt
TC k141_115769 k141_115769_28 30107 32212 - 2.A.37.2.5
Gene ID: k141_115769_22
Type: CAZyme
Location: 23717 - 24784 (+)
Gene ID: k141_115769_23
Type: pfam
Location: 24759 - 25718 (+)
Gene ID: k141_115769_24
Type: pfam
Location: 25730 - 26722 (-)
Gene ID: k141_115769_25
Type: TC
Location: 26752 - 27474 (-)
Gene ID: k141_115769_26
Type: TC
Location: 27544 - 28908 (-)
Gene ID: k141_115769_27
Type: pfam
Location: 29027 - 30088 (-)
Gene ID: k141_115769_28
Type: TC
Location: 30107 - 32212 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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