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Cluster: CGMR092803_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_279587 k141_279587_16 14995 16116 - GT4
TC k141_279587 k141_279587_17 16508 18442 + 3.A.1.5.25
TC k141_279587 k141_279587_18 18521 20026 + 3.A.1.5.10
TC k141_279587 k141_279587_19 20026 20955 + 3.A.1.5.35
TC k141_279587 k141_279587_20 20967 22052 + 3.A.1.5.25
TC k141_279587 k141_279587_21 22045 22977 + 3.A.1.5.25
TF k141_279587 k141_279587_22 23054 23479 + MarR
TC k141_279587 k141_279587_23 23476 25212 + 3.A.1.135.5
TC k141_279587 k141_279587_24 25209 26993 + 3.A.1.135.5
Gene ID: k141_279587_16
Type: CAZyme
Location: 14995 - 16116 (-)
Gene ID: k141_279587_17
Type: TC
Location: 16508 - 18442 (+)
Gene ID: k141_279587_18
Type: TC
Location: 18521 - 20026 (+)
Gene ID: k141_279587_19
Type: TC
Location: 20026 - 20955 (+)
Gene ID: k141_279587_20
Type: TC
Location: 20967 - 22052 (+)
Gene ID: k141_279587_21
Type: TC
Location: 22045 - 22977 (+)
Gene ID: k141_279587_22
Type: TF
Location: 23054 - 23479 (+)
Gene ID: k141_279587_23
Type: TC
Location: 23476 - 25212 (+)
Gene ID: k141_279587_24
Type: TC
Location: 25209 - 26993 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Aerococcaceae
→
Genus
Fundicoccus
→
Species
Fundicoccus ignavus

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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