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Cluster: CGMR092728_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_235896 k141_235896_13 20345 21433 - 2.A.3.9.4
TC k141_235896 k141_235896_14 21430 22935 - 9.A.11.1.2
pfam k141_235896 k141_235896_15 23100 23945 - GHMP_kinases_N | GHMP_kinases_C | MVD-like_N
CAZyme k141_235896 k141_235896_16 24150 25697 - CBM50
pfam k141_235896 k141_235896_17 26043 26327 - VEG
TC k141_235896 k141_235896_18 26497 27843 - 1.A.26.1.2
NULL(UNKNOWN) k141_235896 k141_235896_19 28323 28427 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_235896 k141_235896_20 28554 28937 - 1.E.40.4.3
Gene ID: k141_235896_13
Type: TC
Location: 20345 - 21433 (-)
Gene ID: k141_235896_14
Type: TC
Location: 21430 - 22935 (-)
Gene ID: k141_235896_15
Type: pfam
Location: 23100 - 23945 (-)
Gene ID: k141_235896_16
Type: CAZyme
Location: 24150 - 25697 (-)
Gene ID: k141_235896_17
Type: pfam
Location: 26043 - 26327 (-)
Gene ID: k141_235896_18
Type: TC
Location: 26497 - 27843 (-)
Gene ID: k141_235896_19
Type:
Location: 28323 - 28427 (-)
Gene ID: k141_235896_20
Type: TC
Location: 28554 - 28937 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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