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Cluster: CGMR092294_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2378 k141_2378_118 122570 125056 - 3.A.3.5.15
TF k141_2378 k141_2378_119 125072 125512 - Pencillinase_R
TC k141_2378 k141_2378_120 125640 126803 - 2.A.37.2.1
TC k141_2378 k141_2378_121 126824 128191 - 2.A.38.4.1
pfam k141_2378 k141_2378_122 128323 128865 - RibD_C
TF k141_2378 k141_2378_123 129112 129873 + HTH_6
TC k141_2378 k141_2378_124 130047 131381 + 4.A.3.2.8
CAZyme k141_2378 k141_2378_125 131408 132724 + GH1
Gene ID: k141_2378_118
Type: TC
Location: 122570 - 125056 (-)
Gene ID: k141_2378_119
Type: TF
Location: 125072 - 125512 (-)
Gene ID: k141_2378_120
Type: TC
Location: 125640 - 126803 (-)
Gene ID: k141_2378_121
Type: TC
Location: 126824 - 128191 (-)
Gene ID: k141_2378_122
Type: pfam
Location: 128323 - 128865 (-)
Gene ID: k141_2378_123
Type: TF
Location: 129112 - 129873 (+)
Gene ID: k141_2378_124
Type: TC
Location: 130047 - 131381 (+)
Gene ID: k141_2378_125
Type: CAZyme
Location: 131408 - 132724 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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