Cluster: CGMR092294_CGC35
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR092294
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_2659 | k141_2659_229 | 235450 | 237591 | + | GH92 |
| TF | k141_2659 | k141_2659_230 | 237632 | 239113 | - | HTH_AraC | HTH_AraC |
| TC | k141_2659 | k141_2659_231 | 239125 | 240837 | - | 8.A.59.2.1 |
| pfam | k141_2659 | k141_2659_232 | 240809 | 241444 | - | DUF624 |
| pfam | k141_2659 | k141_2659_233 | 241515 | 242981 | - | DUF3502 |
| TC | k141_2659 | k141_2659_234 | 243005 | 243928 | - | 3.A.1.1.29 |
| TC | k141_2659 | k141_2659_235 | 243940 | 244878 | - | 3.A.1.1.10 |
| pfam | k141_2659 | k141_2659_236 | 245435 | 248773 | - | Gram_pos_anchor | DUF11 | DUF11 |
| TF | k141_2659 | k141_2659_237 | 249247 | 250014 | - | MerR |
| TC | k141_2659 | k141_2659_238 | 250129 | 251856 | + | 3.A.1.135.9 |
| TC | k141_2659 | k141_2659_239 | 251954 | 253687 | + | 3.A.1.135.9 |
| pfam | k141_2659 | k141_2659_240 | 253741 | 254745 | - | tRNA-synt_1b |
| CAZyme | k141_2659 | k141_2659_241 | 254907 | 258686 | - | GH136 |
| NULL(UNKNOWN) | k141_2659 | k141_2659_242 | 258697 | 259665 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_2659 | k141_2659_243 | 259766 | 260437 | - | 9.B.28.3.1 |
| TC | k141_2659 | k141_2659_244 | 260450 | 261328 | - | 3.A.1.1.39 |
| TC | k141_2659 | k141_2659_245 | 261340 | 262242 | - | 3.A.1.1.11 |
| STP | k141_2659 | k141_2659_246 | 262393 | 263670 | - | SBP_bac_1 |
| CAZyme | k141_2659 | k141_2659_247 | 263720 | 264862 | - | GH88 |
| CAZyme | k141_2659 | k141_2659_248 | 264878 | 266677 | - | GH154 |
Gene ID: k141_2659_229
Type: CAZyme
Location: 235450 - 237591 (+)
Type: CAZyme
Location: 235450 - 237591 (+)
Gene ID: k141_2659_230
Type: TF
Location: 237632 - 239113 (-)
Type: TF
Location: 237632 - 239113 (-)
Gene ID: k141_2659_231
Type: TC
Location: 239125 - 240837 (-)
Type: TC
Location: 239125 - 240837 (-)
Gene ID: k141_2659_232
Type: pfam
Location: 240809 - 241444 (-)
Type: pfam
Location: 240809 - 241444 (-)
Gene ID: k141_2659_233
Type: pfam
Location: 241515 - 242981 (-)
Type: pfam
Location: 241515 - 242981 (-)
Gene ID: k141_2659_234
Type: TC
Location: 243005 - 243928 (-)
Type: TC
Location: 243005 - 243928 (-)
Gene ID: k141_2659_235
Type: TC
Location: 243940 - 244878 (-)
Type: TC
Location: 243940 - 244878 (-)
Gene ID: k141_2659_236
Type: pfam
Location: 245435 - 248773 (-)
Type: pfam
Location: 245435 - 248773 (-)
Gene ID: k141_2659_237
Type: TF
Location: 249247 - 250014 (-)
Type: TF
Location: 249247 - 250014 (-)
Gene ID: k141_2659_238
Type: TC
Location: 250129 - 251856 (+)
Type: TC
Location: 250129 - 251856 (+)
Gene ID: k141_2659_239
Type: TC
Location: 251954 - 253687 (+)
Type: TC
Location: 251954 - 253687 (+)
Gene ID: k141_2659_240
Type: pfam
Location: 253741 - 254745 (-)
Type: pfam
Location: 253741 - 254745 (-)
Gene ID: k141_2659_241
Type: CAZyme
Location: 254907 - 258686 (-)
Type: CAZyme
Location: 254907 - 258686 (-)
Gene ID: k141_2659_242
Type:
Location: 258697 - 259665 (-)
Type:
Location: 258697 - 259665 (-)
Gene ID: k141_2659_243
Type: TC
Location: 259766 - 260437 (-)
Type: TC
Location: 259766 - 260437 (-)
Gene ID: k141_2659_244
Type: TC
Location: 260450 - 261328 (-)
Type: TC
Location: 260450 - 261328 (-)
Gene ID: k141_2659_245
Type: TC
Location: 261340 - 262242 (-)
Type: TC
Location: 261340 - 262242 (-)
Gene ID: k141_2659_246
Type: STP
Location: 262393 - 263670 (-)
Type: STP
Location: 262393 - 263670 (-)
Gene ID: k141_2659_247
Type: CAZyme
Location: 263720 - 264862 (-)
Type: CAZyme
Location: 263720 - 264862 (-)
Gene ID: k141_2659_248
Type: CAZyme
Location: 264878 - 266677 (-)
Type: CAZyme
Location: 264878 - 266677 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus
Species
Enterococcus faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.