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Cluster: CGMR092294_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_41091 k141_41091_265 269753 272092 - 3.A.1.122.13
TF k141_41091 k141_41091_266 272238 272726 + MarR
TC k141_41091 k141_41091_267 272764 273627 - 3.A.1.1.27
TC k141_41091 k141_41091_268 273631 274974 - 3.A.1.1.27
TC k141_41091 k141_41091_269 275060 276310 - 3.A.1.1.27
CAZyme k141_41091 k141_41091_270 276570 278336 + CBM34 | GH13_20
CAZyme k141_41091 k141_41091_271 278364 279989 + GH13_31
CAZyme k141_41091 k141_41091_272 279991 281604 + GH13_31
TC k141_41091 k141_41091_273 281775 282356 + 1.A.78.2.8
TC k141_41091 k141_41091_274 282829 285441 + 3.A.3.4.1
Gene ID: k141_41091_265
Type: TC
Location: 269753 - 272092 (-)
Gene ID: k141_41091_266
Type: TF
Location: 272238 - 272726 (+)
Gene ID: k141_41091_267
Type: TC
Location: 272764 - 273627 (-)
Gene ID: k141_41091_268
Type: TC
Location: 273631 - 274974 (-)
Gene ID: k141_41091_269
Type: TC
Location: 275060 - 276310 (-)
Gene ID: k141_41091_270
Type: CAZyme
Location: 276570 - 278336 (+)
Gene ID: k141_41091_271
Type: CAZyme
Location: 278364 - 279989 (+)
Gene ID: k141_41091_272
Type: CAZyme
Location: 279991 - 281604 (+)
Gene ID: k141_41091_273
Type: TC
Location: 281775 - 282356 (+)
Gene ID: k141_41091_274
Type: TC
Location: 282829 - 285441 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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